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AboutBliss  

23 Mar 2005 - 19:17 - NEW   JeffreyBarrick

About BLISS

The BLISS website (Breaker Lab Intergenic Sequence Server) contains BLAST comparisons of intergenic regions (IGRs) from (mostly) microbial genomes. It displays alignments of similar sequences to a chosen IGR with accompanying information about nearby genes, sequence statistics, phylogenetic distributions, intrinsic terminators, and known RNA elements.

We have used it mainly to search for Riboswitches and other possible regulatory RNAs. For more information on our research, please visit the Breaker Lab Website.

Disclaimer

The BLISS website is mainly intended to be an internal tool for the Breaker Lab. It is not meant to be an up-to-date database of microbial genetic regulation. It may contain incorrect annotations and out of date information. It is not meant to be a stable web resource and is subject to change without notice as we adapt it to our use. We provide access to the general scientific public as extra background for our work and with the hope that it may prove useful. We can answer limited questions about its use by e-mail.

 


AdamRoth  

25 Aug 2003 - 19:29 - NEW   AdamRoth

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AlexBateman  

23 Apr 2004 - 21:01 - NEW   AlexBateman

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BenjaminBoese  

22 Aug 2003 - 19:41 - NEW   BenjaminBoese

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BrianTucker  

12 Jan 2004 - 20:33 - NEW   BrianTucker

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ElizabethRegulski  

28 Jul 2004 - 19:10 - NEW   ElizabethRegulski

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FileAttachment  

11 Nov 2000 - 06:32 - r1.3   PeterThoeny?

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GailEmilsson  

19 Dec 2003 - 18:54 - NEW   GailEmilsson

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InbalJona  

31 Oct 2003 - 19:09 - r1.2   InbalJona

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IzabelaPuskarz  

23 Jan 2004 - 16:19 - NEW   IzabelaPuskarz

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JeffreyBarrick  

04 Dec 2003 - 19:24 - r1.2   JeffreyBarrick

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JenniferCollins  

05 Sep 2003 - 15:29 - NEW   JenniferCollins

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JinsooLim  

04 Mar 2004 - 17:30 - NEW   JinsooLim

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JoeGlotz  

04 Dec 2006 - 18:07 - NEW   JoeGlotz

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KeithCorbino  

22 Jul 2003 - 20:01 - NEW   KeithCorbino

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KenWickiser  

24 Nov 2004 - 15:47 - NEW   KenWickiser

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KristianLink  

07 Sep 2004 - 19:06 - NEW   KristianLink

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MarkLee  

29 Aug 2003 - 20:54 - NEW   MarkLee

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MaumitaMandal  

21 Aug 2003 - 20:38 - NEW   MaumitaMandal

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MingCheah  

29 Aug 2003 - 19:26 - NEW   MingCheah

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NarasimhanSudarsan  

22 Aug 2003 - 20:21 - NEW   NarasimhanSudarsan

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NoamRudnick  

17 Jun 2004 - 20:32 - NEW   NoamRudnick

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NobodyGroup  

12 Jan 2003 - 20:09 - r1.2   JohnTalintyre?

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RonaldBreaker  

22 Aug 2003 - 17:11 - NEW   RonaldBreaker

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RuedigerWelz  

11 Apr 2004 - 20:19 - NEW   RuedigerWelz

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ShingoNakamura  

16 Sep 2003 - 18:18 - NEW   ShingoNakamura

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SidneyAltman  

31 Mar 2004 - 15:37 - NEW   SidneyAltman

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SupplementaryInformation1  

04 Dec 2003 - 16:16 - r1.11   JeffreyBarrick

New RNA Motifs Suggest an Expanded Scope for Riboswitches in Bacterial Genetic Control (Supplementary Methods and Website)

Jeffrey E. Barrick, Keith A. Corbino, Wade C. Winkler, Ali Nahvi, Maumita Mandal, Jennifer Collins, Mark Lee, Adam Roth, Narasimhan Sudarsan, Inbal Jona, J. Kenneth Wickiser, and Ronald R. Breaker

Contents

Links

BLISS Overview

The BLISS database integrates comparative genomics information to enable riboswitch discovery in Bacillus subtilis. It begins with automatically generated alignments seeded by BLAST hits between intergenic regions (IGRs) from fully sequenced bacterial genomes and incorporates uniform predictions of gene functions and intrinsic terminators. A web interface to the database allows intergenic regions to be sorted based on genome position or statistics derived from its sequence alignment. An integrated system for collaborative annotation facilitates the exhaustive manual examination of these IGRs for riboswitch candidates.

Genome Sequences

A complete list of the genomes analyzed is available. Genome sequences were downloaded in Genbank format from the NCBI bacterial reference sequence list. Genes on the same strand separated by fewer than 30 nt are usually part of the same transcriptional unit (1) and are not large enough to harbor structured RNA sequences. Therefore, we only considered IGRs with a length of at least 30 nt. Organisms were classified into broad taxonomic groups based on the information in Genbank records and the Complete Microbial Resource at TIGR. Our three-letter organism abbreviations are derived from the COG database when possible.

IGR Sequence Comparisons

We used version 2.2.5 of the BLAST package to compare Bacillus subtilis intergenic regions to intergenic region databases for every other genome. The program BLASTN was used with a word size of 7 nucleotides, a gap open penalty of 2, a gap extension penalty of 2, and a nucleotide penalty of 2 (-W 7 -G 2 -E 2 -q -2). These parameters were found to maximize the ratio of known positive comparisons (hits between two riboswitches) to known negative comparisons (hits between riboswitch intergenic regions and other IGRs) with a set of known riboswitch-containing IGRs within the B. subtilis genome (J.E.B., data not shown). BLAST results were symmetrized by taking the higher E-value for each pair of unidirectional hits between two intergenic regions. Bidirectional hits with E-values <= 0.01 were individually aligned to the B. subtilis sequence using the program ssearch34 from version 3.4 of the FASTA package (2) with a gap opening penalty of 15 (-f -15).

Gene Function Predictions

We used the COG database (September 2003) to uniformly assign gene functions to the genomic data sets (3, 4). Specifically, each annotated protein gene was filtered with the COILS 2.2 program (5) and compared to proteins in the COG database using BLASTPGP with default parameters. From these similarity results proteins were assigned to COGs by the local version of the COGnitor program. Proteins that are the results of gene fusions are often assigned to multiple COGs.

Gene descriptions and names for each COG are derived from the "whog" file of the database distribution. Gene names were assigned from identified genes in a COG with the following priority: (1) If the COG contains an E. coli gene then use this name, (2) If the COG contains a B. subtilis gene then use this name, (3) Otherwise do not assign a name (designated with a dash).

Terminator Predictions

Intrinsic terminators were predicted using a the software program TransTerm available from TIGR (6). The source code was modified to (1) ignore distinctions between head-to-tail and tail-to-tail intergenic regions when scoring terminators and (2) leave separate confidence values for overlapping terminators on opposite strands. The altered source for "smooth_confidence.perl" is available. Terminators with >98% confidence are high quality predictions.

IGR Annotation

The BLISS database links intergenic regions to the open source TWiki collaboration tool. TWiki allows webpages to be edited by any registered user and supports full version control to record a history of all page edits. BLISS generates a separate TWiki webpage for each intergenic region automatically when a user chooses to add annotation. Keywords within these pages are recognized by the web interface to prominently display information on the sortable list of IGRs. Our lab has used these pages to record known riboswitches, transcription-factor binding sites, T boxes, noncoding RNAs and other sequence features in B. subtilis IGRs that cause clusters of BLAST hits. Every remaining intergenic region alignment with at least 5 sequences has been examined for conservation indicative of a regulatory RNA motif.

The archived pages presented here have editing disabled so that a snapshot of the annotation process has been preserved. See the current BLISS pages for the ongoing annotation effort.

Candidate Phylogenies

We manually aligned the BLAST hits from the most promising candidate intergenic regions to create initial models for each putative RNA structure. Matches of these RNA motifs consisting of blocks of consensus sequences and base pairing to our curated set of complete genomes were compiled using the program SequenceSniffer (J.E.B., unpublished program). This program displays the relation of matches to nearby genes so that sequences regulating related genes are readily recognized. The published RNAMotif program allows more general searching for RNA patterns (7). Further BLAST matches to the conserved sequence families were found in other organisms with the NCBI Microbial BLAST page. We iteratively relaxed the RNA consensus model with each expanded alignment and repeated these searches until no new matches could be found.

References

1. Salgado, H., Moreno-Hagelsieb, G., Smith, T.F., and Collado-Vides, J. 2000. Operons in Escherichia coli: Genomic analyses and predictions. Proc. Natl. Acad. Sci. U. S. A. 97: 6652-6657.

2. Pearson, W.R. 2000. Flexible Sequence Similarity Searching with the FASTA3 Program Package. In Bioinformatics Methods and Protocols. (eds. S. Misener, and S.A. Krawetz), pp. 185-219. Humana Press, Totowa, NJ.

3. Tatusov, R.L., Koonin, E.V., and Lipman, D.J. 1997. A genomic perspective on protein families. Science 278: 631-637.

4. Tatusov, R.L., Natale, D.A., Garkavtsev, I.V., Tatusova, T.A., Shankavaram, U.T., Rao, B.S., Kiryutin, B., Galperin, M.Y., Fedorova, N.D., and Koonin, E.V. 2001. The COG database: New developments in phylogenetic classification of proteins from complete genomes. Nucleic Acids Res. 29: 22-28.

5. Lupas, A. 1996. Prediction and analysis of coiled-coil structures. Method Enzymol 266: 513-525.

6. Ermolaeva, M.D., Khalak, H.G., White, O., Smith, H.O., and Salzberg, S.L. 2000. Prediction of transcription terminators in bacterial genomes. J. Mol. Biol. 301: 27-33.

7. Macke, T.J., Ecker, D.J., Gutell, R.R., Gautheret, D., Case, D.A., and Sampath, R. 2001. RNAMotif, an RNA secondary structure definition and search algorithm. Nucleic Acids Res. 29: 4724-4735.

 


SupplementaryInformation3  

21 Jul 2005 - 12:06 - r1.3   JeffreyBarrick

6S RNA is a widespread regulator of eubacterial RNA polymerase that resembles an open promoter

Barrick JE, Sudarsan N, Weinberg Z, Ruzzo WL, Breaker RR

Supporting Data

Supplemental_File_S1.sto
Manual alignment of 121 6S RNA sequences (Stockholm format).

Supplemental_File_S2.sto
Full computational alignment of all 6S RNA sequences (Stockholm format).

Supplemental_File_S3.tree
Tree file of 121 6S RNA sequences (Phylip format).

 


SupplementaryInformation4  

10 Aug 2006 - 20:20 - r1.2   JeffreyBarrick

Notes

Riboswitch Stockholm HTML
TPP Stockholm HTML
AdoCbl Stockholm HTML
Lysine Stockholm HTML
Glycine Stockholm HTML
SAM-I Stockholm HTML
FMN Stockholm HTML
Purine Stockholm HTML
GlcN6P Stockholm HTML
PreQ1 Stockholm HTML
SAM-II Stockholm HTML

 


TWikiAdminGroup  

22 Sep 2003 - 18:18 - r1.8   JeffreyBarrick

TWiki Administrator Group

(Note: Set the members of TWiki Administrator Group in GROUP, then enable the ALLOWTOPICCHANGE variable by removing # sign)

Related topics: TWikiUsers, TWikiGroups, TWikiAccessControl

-- PeterThoeny? - 28 Oct 2000

 


TWikiGroups  

22 Sep 2003 - 18:17 - r1.4   JeffreyBarrick

These groups can be used to define fine grained TWikiAccessControl in TWiki:

Add your groups to this list and define new group topics similar to existing ones. Group topics must end in ...Group.

IMPORTANT NOTE: Think twice before restricting write access to a web or a topic, because an open system where everybody can contribute is the essence of the WikiCulture. Experience shows that unrestricted write access works very well because:

Related topics: TWikiAccessControl, WebPreferences, TWikiUsers, WikiCulture.

-- PeterThoeny? - 07 Nov 2000

 


TWikiGuest  

19 Aug 2000 - 00:36 - r1.5   PeterThoeny?

A guest of this TWiki web, not unlike yourself. You can leave your trace behind you, just add your name in TWikiRegistration and create your own page.

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TWikiPreferences  

18 Sep 2005 - 22:21 - NEW   JeffreyBarrick

The site-level preferences are located in TWiki.TWikiPreferences

-- JeffreyBarrick - 18 Sep 2005

 


TWikiUsers  

04 Dec 2006 - 18:07 - r1.44   JoeGlotz

List of TWiki users

Please take the time and add yourself to the list. To do that fill out the form in TWikiRegistration. This will create an account for you which allows you to edit topics.

A B C D E F G H I J K L M N O P Q R S T U V W X Y Z

A B C D E F G H I J K L M N O P Q R S T U V W X Y Z

Note: Do not edit this topic to add a user, use TWikiRegistration instead.

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TWikiVariables  

12 Jan 2003 - 00:29 - r1.3   PeterThoeny?

See TWiki.TWikiVariables

 


WadeWinkler  

22 Jul 2003 - 20:05 - NEW   WadeWinkler

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WebChanges  

16 Aug 2001 - 19:56 - r1.2   PeterThoeny?

Topics in Main web: Changed: now 07:08 GMT Changed by:
WebStatistics 22 Nov 2009 - 07:37 - r1.490 TWikiGuest
Statistics for Main Web Month: Topic views: Topic saves: File uploads: Most popular topic views: Top contributors for topic save and uploads: Nov 2009 8071 0 0 3877 ...  
JoeGlotz 04 Dec 2006 - 18:07 - NEW JoeGlotz
Name: Joe Glotz Email: Joe@joe.com Company Name: Company URL: Comment: Personal Preferences (details in TWIKIWEB .TWikiVariables) Horizontal size of text edit box ...  
TWikiUsers 04 Dec 2006 - 18:07 - r1.44 JoeGlotz
List of TWiki users Please take the time and add yourself to the list. To do that fill out the form in TWIKIWEB .TWikiRegistration. This will create an account for ...  
SupplementaryInformation4 10 Aug 2006 - 20:20 - r1.2 JeffreyBarrick
Notes I recommend viewing the HTML alignnments. The stems and secondary structure are labeled at the bottom of the files. Pseudoknots are not currently annotated ...  
WebHome 06 Nov 2005 - 23:12 - r1.37 JeffreyBarrick
What is BLISS? The BLISS website (Breaker Lab Intergenic Sequence Server) contains BLAST comparisons of intergenic regions (IGRs) from (mostly) microbial genomes ...  
TWikiPreferences 18 Sep 2005 - 22:21 - NEW JeffreyBarrick
The site-level preferences are located in TWIKIWEB .TWikiPreferences Set ALLOWTOPICCHANGE MAINWEB .TWikiAdminGroup Set ALLOWTOPICRENAME MAINWEB .TWikiAdminGroup ...  
SupplementaryInformation3 21 Jul 2005 - 12:06 - r1.3 JeffreyBarrick
6S RNA is a widespread regulator of eubacterial RNA polymerase that resembles an open promoter Barrick JE, Sudarsan N, Weinberg Z, Ruzzo WL, Breaker RR Supporting ...  
AboutBliss 23 Mar 2005 - 19:17 - NEW JeffreyBarrick
About BLISS The BLISS website (Breaker Lab Intergenic Sequence Server) contains BLAST comparisons of intergenic regions (IGRs) from (mostly) microbial genomes. It ...  
KenWickiser 24 Nov 2004 - 15:47 - NEW KenWickiser
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JeffreyBarrick 04 Dec 2003 - 19:24 - r1.2 JeffreyBarrick
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SupplementaryInformation1 04 Dec 2003 - 16:16 - r1.11 JeffreyBarrick
New RNA Motifs Suggest an Expanded Scope for Riboswitches in Bacterial Genetic Control ( Supplementary Methods and Website ) Jeffrey E. Barrick, Keith A. Corbino ...  
InbalJona 31 Oct 2003 - 19:09 - r1.2 InbalJona
Name: Inbal Jona Email: inbaljona@yahoo.com Company Name: Company URL: Location: TokyoOffice Country: Armenia Comment: Personal Preferences (details in TWIKIWEB ...  
WebPreferences 22 Sep 2003 - 20:34 - r1.15 JeffreyBarrick
TWiki.Main Web Preferences The following settings are web preferences of the TWiki.Main web. These preferences overwrite the site-level preferences in TWIKIWEB . ...  
TWikiAdminGroup 22 Sep 2003 - 18:18 - r1.8 JeffreyBarrick
TWiki Administrator Group Set GROUP Main.JeffreyBarrick Set ALLOWTOPICCHANGE TWikiAdminGroup (Note: Set the members of TWiki Administrator Group in GROUP, then enable ...  
TWikiGroups 22 Sep 2003 - 18:17 - r1.4 JeffreyBarrick
These groups can be used to define fine grained TWIKIWEB .TWikiAccessControl in TWiki: TWikiAdminGroup Add your groups to this list and define new group topics similar ...  
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WadeWinkler 22 Jul 2003 - 20:05 - NEW WadeWinkler
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WebRss 30 Jan 2003 - 08:14 - NEW PeterThoeny?
TWiki's Main web SCRIPTURL /view SCRIPTSUFFIX /Main The web for users, groups and offices. TWiki is a Web-Based Collaboration Platform for the Corporate World. INCLUDE ...  
WebNotify 25 Jan 2003 - 10:04 - r1.7 PeterThoeny?
This is a subscription service to be automatically notified by e-mail when topics change in this Main web. This is a convenient service, so you do not have to come ...  
NobodyGroup 12 Jan 2003 - 20:09 - r1.2 JohnTalintyre?
Nobody Group Set GROUP Set ALLOWTOPICCHANGE TWikiAdminGroup Used to prevent dangerous actions e.g. renaming TWIKIWEB .TWikiPreferences put NobodyGroup as the only ...  
TWikiVariables 12 Jan 2003 - 00:29 - r1.3 PeterThoeny?
See TWIKIWEB .TWikiVariables  
WebIndex 24 Nov 2001 - 11:36 - r1.2 PeterThoeny?
SEARCH{"\. " scope "topic" regex "on" nosearch "on"} See also the faster WebTopicList  
WebTopicList 24 Nov 2001 - 11:36 - NEW PeterThoeny?
TOPICLIST{" $name "} See also the verbose WebIndex.  
WebChanges 16 Aug 2001 - 19:56 - r1.2 PeterThoeny?
INCLUDE{" TWIKIWEB .WebChanges"}  
WebSearch 08 Aug 2001 - 05:57 - r1.8 PeterThoeny?
INCLUDE{" TWIKIWEB .WebSearch"}  
FileAttachment 11 Nov 2000 - 06:32 - r1.3 PeterThoeny?
INCLUDE{" TWIKIWEB .FileAttachment"}  
TWikiGuest 19 Aug 2000 - 00:36 - r1.5 PeterThoeny?
A guest of this TWiki web, not unlike yourself. You can leave your trace behind you, just add your name in TWIKIWEB .TWikiRegistration and create your own page. Personal ...  

Number of topics: 47

 


WebHome  

06 Nov 2005 - 23:12 - r1.37   JeffreyBarrick

What is BLISS?

The BLISS website (Breaker Lab Intergenic Sequence Server) contains BLAST comparisons of intergenic regions (IGRs) from (mostly) microbial genomes. It displays alignments of similar sequences to a chosen IGR with accompanying information about nearby genes, sequence statistics, phylogenetic distributions, intrinsic terminators, and known RNA elements. We have used it mainly to search for regulatory RNA motifs that have not been previously identified. These motifs are candidates for novel riboswitches. For more information on our research, please visit the Breaker Lab Website.

Resources

Current BLISS Site

Collaborative annotation of intergenic region sequence comparisons between 116 microbial genomes.

Reference: Corbino KA, Barrick JE, Lim J, Welz R, Tucker BJ, Puskarz I, Mandal M, Rudnick N, Breaker RR. Evidence for a second class of S-adenosylmethionine riboswitches and other regulatory RNA motifs in alpha-proteobacteria Genome Biol. 6: R70 (2005). [ Pubmed ]

Archived BLISS Site

Static release of BLISS for Bacillus subtilis intergenic regions against 93 other microbial genomes.

Reference: Barrick JE, Corbino KA, Winkler WC, Nahvi A, Mandal M, Collins J, Lee M, Roth A, Sudarsan N, Jona I, Wickiser JK, Breaker RR. New RNA Motifs Suggest an Expanded Scope for Riboswitches in Bacterial Genetic Control. Proc. Natl. Acad. Sci USA 101: 6421-6426 (2004). [ Pubmed ] [ Supplementary Information ]

Supplementary Data

Reference: Barrick JE, Sudarsan N, Weinberg Z, Ruzzo WL, Breaker RR. 6S RNA is a widespread regulator of eubacterial RNA polymerase that resembles an open promoter. RNA 11:774-84 (2005). [ Pubmed ] [ Supplementary Information ]

Links

Disclaimer

The BLISS website is mainly intended to be an internal tool for the Breaker Lab. It is not meant to be an up-to-date database of microbial genetic regulation. It may contain incorrect annotations and out-of-date information. It is not meant to be a stable web resource and is subject to change without notice as we adapt it to our use. We provide access to the general scientific public as extra background for our work and with the hope that it may prove useful. We can answer limited questions about its use by e-mail.

 


WebIndex  

24 Nov 2001 - 11:36 - r1.2   PeterThoeny?

Topics in Main web: Changed: now 07:08 GMT Changed by:
AboutBliss 23 Mar 2005 - 19:17 - NEW JeffreyBarrick
About BLISS The BLISS website (Breaker Lab Intergenic Sequence Server) contains BLAST comparisons of intergenic regions (IGRs) from (mostly) microbial genomes. It ...  
AdamRoth 25 Aug 2003 - 19:29 - NEW AdamRoth
Name: AdamRoth Email: foo@foo.bar Company Name: Company URL: Location: LondonOffice Country: Fiji Comment: Personal Preferences (details in TWIKIWEB .TWikiVariables ...  
AlexBateman 23 Apr 2004 - 21:01 - NEW AlexBateman
Name: Alex Bateman Email: foo@foo.com Company Name: Company URL: Comment: Personal Preferences (details in TWIKIWEB .TWikiVariables) Horizontal size of text edit ...  
BenjaminBoese 22 Aug 2003 - 19:41 - NEW BenjaminBoese
Name: BenjaminBoese Email: foo@foo.bar Company Name: Company URL: http:// Location: TokyoOffice Country: Bangladesh Comment: Personal Preferences (details in TWIKIWEB ...  
BrianTucker 12 Jan 2004 - 20:33 - NEW BrianTucker
Name: Brian Tucker Email: foo@foo.com Company Name: Company URL: Comment: Personal Preferences (details in TWIKIWEB .TWikiVariables) Horizontal size of text edit ...  
ElizabethRegulski 28 Jul 2004 - 19:10 - NEW ElizabethRegulski
Name: Elizabeth Regulski Email: elizabeth.regulski@yale.edu Company Name: Company URL: Comment: Personal Preferences (details in TWIKIWEB .TWikiVariables) Horizontal ...  
FileAttachment 11 Nov 2000 - 06:32 - r1.3 PeterThoeny?
INCLUDE{" TWIKIWEB .FileAttachment"}  
GailEmilsson 19 Dec 2003 - 18:54 - NEW GailEmilsson
Name: Gail Emilsson Email: gail.emilsson@yale.edu Company Name: Company URL: Comment: Personal Preferences (details in TWIKIWEB .TWikiVariables) Horizontal size of ...  
InbalJona 31 Oct 2003 - 19:09 - r1.2 InbalJona
Name: Inbal Jona Email: inbaljona@yahoo.com Company Name: Company URL: Location: TokyoOffice Country: Armenia Comment: Personal Preferences (details in TWIKIWEB ...  
IzabelaPuskarz 23 Jan 2004 - 16:19 - NEW IzabelaPuskarz
Name: Izabela Puskarz Email: iz@tokio.com Company Name: Company URL: Comment: Personal Preferences (details in TWIKIWEB .TWikiVariables) Horizontal size of text edit ...  
JeffreyBarrick 04 Dec 2003 - 19:24 - r1.2 JeffreyBarrick
Name: Jeffrey Barrick Email: jeffrey.barrick@yale.edu Company Name: Company URL: Location: (Please specify office location) Country: USA Comment: Personal Preferences ...  
JenniferCollins 05 Sep 2003 - 15:29 - NEW JenniferCollins
Name: Jennifer Collins Email: foo@foo.com Company Name: Company URL: Location: TokyoOffice Country: Suriname Comment: Personal Preferences (details in TWIKIWEB .TWikiVariables ...  
JinsooLim 04 Mar 2004 - 17:30 - NEW JinsooLim
Name: Jinsoo Lim Email: fake@fake.com Company Name: Company URL: Comment: Personal Preferences (details in TWIKIWEB .TWikiVariables) Horizontal size of text edit ...  
JoeGlotz 04 Dec 2006 - 18:07 - NEW JoeGlotz
Name: Joe Glotz Email: Joe@joe.com Company Name: Company URL: Comment: Personal Preferences (details in TWIKIWEB .TWikiVariables) Horizontal size of text edit box ...  
KeithCorbino 22 Jul 2003 - 20:01 - NEW KeithCorbino
Name: Keith Corbino Email: keith.corbino@yale.edu Company Name: Yale University Company URL: http://www.yale.edu Location: SanJoseOffice Country: Algeria Comment ...  
KenWickiser 24 Nov 2004 - 15:47 - NEW KenWickiser
Name: Ken Wickiser Email: foo@foo.com Company Name: Company URL: Comment: Personal Preferences (details in TWIKIWEB .TWikiVariables) Horizontal size of text edit ...  
KristianLink 07 Sep 2004 - 19:06 - NEW KristianLink
Name: Kristian Link Email: linkk 1975@yahoo.com Company Name: Company URL: Comment: Personal Preferences (details in TWIKIWEB .TWikiVariables) Horizontal size of ...  
MarkLee 29 Aug 2003 - 20:54 - NEW MarkLee
Name: Mark Lee Email: foo@bar.com Company Name: Company URL: Location: LondonOffice Country: Aruba Comment: Personal Preferences (details in TWIKIWEB .TWikiVariables ...  
MaumitaMandal 21 Aug 2003 - 20:38 - NEW MaumitaMandal
Name: MaumitaMandal Email: foo@foo.com Company Name: Company URL: Location: SanJoseOffice Country: Angola Comment: Personal Preferences (details in TWIKIWEB .TWikiVariables ...  
MingCheah 29 Aug 2003 - 19:26 - NEW MingCheah
Name: Ming Cheah Email: foo@foo.com Company Name: Company URL: Location: LondonOffice Country: Angola Comment: Personal Preferences (details in TWIKIWEB .TWikiVariables ...  
NarasimhanSudarsan 22 Aug 2003 - 20:21 - NEW NarasimhanSudarsan
Name: NarasimhanSudarsan Email: foo@bar.com Company Name: Company URL: Location: SanJoseOffice Country: Albania Comment: Personal Preferences (details in TWIKIWEB ...  
NoamRudnick 17 Jun 2004 - 20:32 - NEW NoamRudnick
Name: Noam Rudnick Email: bob@bob.com Company Name: Company URL: Comment: Personal Preferences (details in TWIKIWEB .TWikiVariables) Horizontal size of text edit ...  
NobodyGroup 12 Jan 2003 - 20:09 - r1.2 JohnTalintyre?
Nobody Group Set GROUP Set ALLOWTOPICCHANGE TWikiAdminGroup Used to prevent dangerous actions e.g. renaming TWIKIWEB .TWikiPreferences put NobodyGroup as the only ...  
RonaldBreaker 22 Aug 2003 - 17:11 - NEW RonaldBreaker
Name: RonaldBreaker Email: foo@foo.com Company Name: Company URL: Location: SanJoseOffice Country: USA Comment: Personal Preferences (details in TWIKIWEB .TWikiVariables ...  
RuedigerWelz 11 Apr 2004 - 20:19 - NEW RuedigerWelz
Name: Ruediger Welz Email: fake@fake.com Company Name: Company URL: Comment: Personal Preferences (details in TWIKIWEB .TWikiVariables) Horizontal size of text edit ...  
ShingoNakamura 16 Sep 2003 - 18:18 - NEW ShingoNakamura
Name: Shingo Nakamura Email: fake@fake.com Company Name: Company URL: Location: LondonOffice Country: Andorra Comment: Personal Preferences (details in TWIKIWEB ...  
SidneyAltman 31 Mar 2004 - 15:37 - NEW SidneyAltman
Name: Sidney Altman Email: foo@fake.com Company Name: Company URL: Comment: Personal Preferences (details in TWIKIWEB .TWikiVariables) Horizontal size of text edit ...  
SupplementaryInformation1 04 Dec 2003 - 16:16 - r1.11 JeffreyBarrick
New RNA Motifs Suggest an Expanded Scope for Riboswitches in Bacterial Genetic Control ( Supplementary Methods and Website ) Jeffrey E. Barrick, Keith A. Corbino ...  
SupplementaryInformation3 21 Jul 2005 - 12:06 - r1.3 JeffreyBarrick
6S RNA is a widespread regulator of eubacterial RNA polymerase that resembles an open promoter Barrick JE, Sudarsan N, Weinberg Z, Ruzzo WL, Breaker RR Supporting ...  
SupplementaryInformation4 10 Aug 2006 - 20:20 - r1.2 JeffreyBarrick
Notes I recommend viewing the HTML alignnments. The stems and secondary structure are labeled at the bottom of the files. Pseudoknots are not currently annotated ...  
TWikiAdminGroup 22 Sep 2003 - 18:18 - r1.8 JeffreyBarrick
TWiki Administrator Group Set GROUP Main.JeffreyBarrick Set ALLOWTOPICCHANGE TWikiAdminGroup (Note: Set the members of TWiki Administrator Group in GROUP, then enable ...  
TWikiGroups 22 Sep 2003 - 18:17 - r1.4 JeffreyBarrick
These groups can be used to define fine grained TWIKIWEB .TWikiAccessControl in TWiki: TWikiAdminGroup Add your groups to this list and define new group topics similar ...  
TWikiGuest 19 Aug 2000 - 00:36 - r1.5 PeterThoeny?
A guest of this TWiki web, not unlike yourself. You can leave your trace behind you, just add your name in TWIKIWEB .TWikiRegistration and create your own page. Personal ...  
TWikiPreferences 18 Sep 2005 - 22:21 - NEW JeffreyBarrick
The site-level preferences are located in TWIKIWEB .TWikiPreferences Set ALLOWTOPICCHANGE MAINWEB .TWikiAdminGroup Set ALLOWTOPICRENAME MAINWEB .TWikiAdminGroup Main ...  
TWikiUsers 04 Dec 2006 - 18:07 - r1.44 JoeGlotz
List of TWiki users Please take the time and add yourself to the list. To do that fill out the form in TWIKIWEB .TWikiRegistration. This will create an account for ...  
TWikiVariables 12 Jan 2003 - 00:29 - r1.3 PeterThoeny?
See TWIKIWEB .TWikiVariables  
WadeWinkler 22 Jul 2003 - 20:05 - NEW WadeWinkler
Name: WadeWinkler Email: wade.winkler@yale.edu Company Name: Yale University Company URL: http://riboswitches.com Location: SanJoseOffice Country: Albania Comment ...  
WebChanges 16 Aug 2001 - 19:56 - r1.2 PeterThoeny?
INCLUDE{" TWIKIWEB .WebChanges"}  
WebHome 06 Nov 2005 - 23:12 - r1.37 JeffreyBarrick
What is BLISS? The BLISS website (Breaker Lab Intergenic Sequence Server) contains BLAST comparisons of intergenic regions (IGRs) from (mostly) microbial genomes ...  
WebIndex 24 Nov 2001 - 11:36 - r1.2 PeterThoeny?
SEARCH{"\. " scope "topic" regex "on" nosearch "on"} See also the faster WebTopicList  
WebNotify 25 Jan 2003 - 10:04 - r1.7 PeterThoeny?
This is a subscription service to be automatically notified by e-mail when topics change in this Main web. This is a convenient service, so you do not have to come ...  
WebPreferences 22 Sep 2003 - 20:34 - r1.15 JeffreyBarrick
TWiki.Main Web Preferences The following settings are web preferences of the TWiki.Main web. These preferences overwrite the site-level preferences in TWIKIWEB . ...  
WebRss 30 Jan 2003 - 08:14 - NEW PeterThoeny?
TWiki's Main web SCRIPTURL /view SCRIPTSUFFIX /Main The web for users, groups and offices. TWiki is a Web-Based Collaboration Platform for the Corporate World. INCLUDE ...  
WebSearch 08 Aug 2001 - 05:57 - r1.8 PeterThoeny?
INCLUDE{" TWIKIWEB .WebSearch"}  
WebStatistics 22 Nov 2009 - 07:37 - r1.490 TWikiGuest
Statistics for Main Web Month: Topic views: Topic saves: File uploads: Most popular topic views: Top contributors for topic save and uploads: Nov 2009 8071 0 0 3877 ...  
WebTopicList 24 Nov 2001 - 11:36 - NEW PeterThoeny?
TOPICLIST{" $name "} See also the verbose WebIndex.  
ZashaWeinberg 23 Mar 2004 - 14:18 - NEW ZashaWeinberg
Name: Zasha Weinberg Email: foo@foo.com Company Name: Company URL: Comment: Personal Preferences (details in TWIKIWEB .TWikiVariables) Horizontal size of text edit ...  

Number of topics: 47

See also the faster WebTopicList

 


WebNotify  

25 Jan 2003 - 10:04 - r1.7   PeterThoeny?

This is a subscription service to be automatically notified by e-mail when topics change in this Main web. This is a convenient service, so you do not have to come back and check all the time if something has changed. To subscribe, please add a bullet with your WikiName in alphabetical order to this list:

Format: <space><space><space>, followed by:
* Main.yourWikiName (if you want that the e-mail address in your home page is used)
* Main.yourWikiName - yourEmailAddress (if you want to specify a different e-mail address)
* Main.anyTWikiGroup (if you want to notify all members of a particular TWikiGroup)

Related topics: TWikiUsers, TWikiRegistration

 


WebPreferences  

22 Sep 2003 - 20:34 - r1.15   JeffreyBarrick

TWiki.Main Web Preferences

The following settings are web preferences of the TWiki.Main web. These preferences overwrite the site-level preferences in TWikiPreferences, and can be overwritten by user preferences (your personal topic, i.e. TWikiGuest in the TWiki.Main web)

Preferences:

Notes:

Related Topics:

 


WebRss  

30 Jan 2003 - 08:14 - NEW   PeterThoeny?

TWiki's Main web http://bliss.biology.yale.edu/twiki/bin/view/Main The web for users, groups and offices. TWiki is a Web-Based Collaboration Platform for the Corporate World. en-us Copyright 2009, Peter Thoeny and contributing authors. Peter Thoeny [Peter@Thoeny.com] Peter Thoeny [Peter@Thoeny.com] TWiki TWiki.Main TWiki.Main http://bliss.biology.yale.edu/twiki/bin/view/Main http://bliss.biology.yale.edu/twiki/pub/TWiki/TWikiLogos/twikilogo88x31.gif WebStatistics http://bliss.biology.yale.edu/twiki/bin/view/Main/WebStatistics Statistics for Main Web Month: Topic views: Topic saves: File uploads: Most popular topic views: Top contributors for topic save and uploads: Nov 2009 8071 0 0 3877 ... 2009-11-22T07:37:00Z guest 1.490 updated major http://bliss.biology.yale.edu/twiki/bin/rdiff/Main/WebStatistics http://bliss.biology.yale.edu/twiki/bin/rdiff/Main/WebStatistics JoeGlotz http://bliss.biology.yale.edu/twiki/bin/view/Main/JoeGlotz Name: Joe Glotz Email: Joe@joe.com Company Name: Company URL: Comment: Personal Preferences (details in TWIKIWEB .TWikiVariables) Horizontal size of text edit box ... 2006-12-04T18:07:00Z JoeGlotz 1.1 updated major http://bliss.biology.yale.edu/twiki/bin/rdiff/Main/JoeGlotz http://bliss.biology.yale.edu/twiki/bin/rdiff/Main/JoeGlotz TWikiUsers http://bliss.biology.yale.edu/twiki/bin/view/Main/TWikiUsers List of TWiki users Please take the time and add yourself to the list. To do that fill out the form in TWIKIWEB .TWikiRegistration. This will create an account for ... 2006-12-04T18:07:00Z JoeGlotz 1.44 updated major http://bliss.biology.yale.edu/twiki/bin/rdiff/Main/TWikiUsers http://bliss.biology.yale.edu/twiki/bin/rdiff/Main/TWikiUsers SupplementaryInformation4 http://bliss.biology.yale.edu/twiki/bin/view/Main/SupplementaryInformation4 Notes I recommend viewing the HTML alignnments. The stems and secondary structure are labeled at the bottom of the files. Pseudoknots are not currently annotated ... 2006-08-10T20:20:00Z JeffreyBarrick 1.2 updated major http://bliss.biology.yale.edu/twiki/bin/rdiff/Main/SupplementaryInformation4 http://bliss.biology.yale.edu/twiki/bin/rdiff/Main/SupplementaryInformation4 WebHome http://bliss.biology.yale.edu/twiki/bin/view/Main/WebHome What is BLISS? The BLISS website (Breaker Lab Intergenic Sequence Server) contains BLAST comparisons of intergenic regions (IGRs) from (mostly) microbial genomes ... 2005-11-06T23:12:00Z JeffreyBarrick 1.37 updated major http://bliss.biology.yale.edu/twiki/bin/rdiff/Main/WebHome http://bliss.biology.yale.edu/twiki/bin/rdiff/Main/WebHome TWikiPreferences http://bliss.biology.yale.edu/twiki/bin/view/Main/TWikiPreferences The site-level preferences are located in TWIKIWEB .TWikiPreferences Set ALLOWTOPICCHANGE MAINWEB .TWikiAdminGroup Set ALLOWTOPICRENAME MAINWEB .TWikiAdminGroup Main ... 2005-09-18T22:21:00Z JeffreyBarrick 1.1 updated major http://bliss.biology.yale.edu/twiki/bin/rdiff/Main/TWikiPreferences http://bliss.biology.yale.edu/twiki/bin/rdiff/Main/TWikiPreferences SupplementaryInformation3 http://bliss.biology.yale.edu/twiki/bin/view/Main/SupplementaryInformation3 6S RNA is a widespread regulator of eubacterial RNA polymerase that resembles an open promoter Barrick JE, Sudarsan N, Weinberg Z, Ruzzo WL, Breaker RR Supporting ... 2005-07-21T12:06:00Z JeffreyBarrick 1.3 updated major http://bliss.biology.yale.edu/twiki/bin/rdiff/Main/SupplementaryInformation3 http://bliss.biology.yale.edu/twiki/bin/rdiff/Main/SupplementaryInformation3 AboutBliss http://bliss.biology.yale.edu/twiki/bin/view/Main/AboutBliss About BLISS The BLISS website (Breaker Lab Intergenic Sequence Server) contains BLAST comparisons of intergenic regions (IGRs) from (mostly) microbial genomes. It ... 2005-03-23T19:17:00Z JeffreyBarrick 1.1 updated major http://bliss.biology.yale.edu/twiki/bin/rdiff/Main/AboutBliss http://bliss.biology.yale.edu/twiki/bin/rdiff/Main/AboutBliss KenWickiser http://bliss.biology.yale.edu/twiki/bin/view/Main/KenWickiser Name: Ken Wickiser Email: foo@foo.com Company Name: Company URL: Comment: Personal Preferences (details in TWIKIWEB .TWikiVariables) Horizontal size of text edit ... 2004-11-24T15:47:00Z KenWickiser 1.1 updated major http://bliss.biology.yale.edu/twiki/bin/rdiff/Main/KenWickiser http://bliss.biology.yale.edu/twiki/bin/rdiff/Main/KenWickiser KristianLink http://bliss.biology.yale.edu/twiki/bin/view/Main/KristianLink Name: Kristian Link Email: linkk 1975@yahoo.com Company Name: Company URL: Comment: Personal Preferences (details in TWIKIWEB .TWikiVariables) Horizontal size of ... 2004-09-07T19:06:00Z KristianLink 1.1 updated major http://bliss.biology.yale.edu/twiki/bin/rdiff/Main/KristianLink http://bliss.biology.yale.edu/twiki/bin/rdiff/Main/KristianLink ElizabethRegulski http://bliss.biology.yale.edu/twiki/bin/view/Main/ElizabethRegulski Name: Elizabeth Regulski Email: elizabeth.regulski@yale.edu Company Name: Company URL: Comment: Personal Preferences (details in TWIKIWEB .TWikiVariables) Horizontal ... 2004-07-28T19:10:00Z ElizabethRegulski 1.1 updated major http://bliss.biology.yale.edu/twiki/bin/rdiff/Main/ElizabethRegulski http://bliss.biology.yale.edu/twiki/bin/rdiff/Main/ElizabethRegulski NoamRudnick http://bliss.biology.yale.edu/twiki/bin/view/Main/NoamRudnick Name: Noam Rudnick Email: bob@bob.com Company Name: Company URL: Comment: Personal Preferences (details in TWIKIWEB .TWikiVariables) Horizontal size of text edit ... 2004-06-17T20:32:00Z NoamRudnick 1.1 updated major http://bliss.biology.yale.edu/twiki/bin/rdiff/Main/NoamRudnick http://bliss.biology.yale.edu/twiki/bin/rdiff/Main/NoamRudnick AlexBateman http://bliss.biology.yale.edu/twiki/bin/view/Main/AlexBateman Name: Alex Bateman Email: foo@foo.com Company Name: Company URL: Comment: Personal Preferences (details in TWIKIWEB .TWikiVariables) Horizontal size of text edit ... 2004-04-23T21:01:00Z AlexBateman 1.1 updated major http://bliss.biology.yale.edu/twiki/bin/rdiff/Main/AlexBateman http://bliss.biology.yale.edu/twiki/bin/rdiff/Main/AlexBateman RuedigerWelz http://bliss.biology.yale.edu/twiki/bin/view/Main/RuedigerWelz Name: Ruediger Welz Email: fake@fake.com Company Name: Company URL: Comment: Personal Preferences (details in TWIKIWEB .TWikiVariables) Horizontal size of text edit ... 2004-04-11T20:19:00Z RuedigerWelz 1.1 updated major http://bliss.biology.yale.edu/twiki/bin/rdiff/Main/RuedigerWelz http://bliss.biology.yale.edu/twiki/bin/rdiff/Main/RuedigerWelz SidneyAltman http://bliss.biology.yale.edu/twiki/bin/view/Main/SidneyAltman Name: Sidney Altman Email: foo@fake.com Company Name: Company URL: Comment: Personal Preferences (details in TWIKIWEB .TWikiVariables) Horizontal size of text edit ... 2004-03-31T15:37:00Z SidneyAltman 1.1 updated major http://bliss.biology.yale.edu/twiki/bin/rdiff/Main/SidneyAltman http://bliss.biology.yale.edu/twiki/bin/rdiff/Main/SidneyAltman ZashaWeinberg http://bliss.biology.yale.edu/twiki/bin/view/Main/ZashaWeinberg Name: Zasha Weinberg Email: foo@foo.com Company Name: Company URL: Comment: Personal Preferences (details in TWIKIWEB .TWikiVariables) Horizontal size of text edit ... 2004-03-23T14:18:00Z ZashaWeinberg 1.1 updated major http://bliss.biology.yale.edu/twiki/bin/rdiff/Main/ZashaWeinberg http://bliss.biology.yale.edu/twiki/bin/rdiff/Main/ZashaWeinberg

 


WebSearch  

08 Aug 2001 - 05:57 - r1.8   PeterThoeny?

 


WebStatistics  

22 Nov 2009 - 07:37 - r1.490   TWikiGuest

Statistics for Main Web

Month: Topic
views:
Topic
saves:
File
uploads:
Most popular
topic views:
Top contributors for
topic save and uploads:
Nov 2009 8071 0 0 3877 WebStatistics
1531 WebHome
394 TWikiVariables
171 TWikiUsers
105 WebNotify
103 WebSearch
103 SupplementaryInformation1
 92 WebChanges
 90 SupplementaryInformation3
 83 WebPreferences
 82 TWikiAdminGroup
 
Oct 2009 16575 0 0 8643 WebStatistics
2320 WebHome
1257 TWikiVariables
544 TWikiUsers
265 SupplementaryInformation1
243 WebPreferences
207 WebChanges
192 WebSearch
173 WebNotify
157 TWikiGuest
146 WebIndex
 
Sep 2009 10751 0 0 7215 WebStatistics
944 WebHome
392 TWikiVariables
370 TWikiUsers
128 WebPreferences
127 SupplementaryInformation1
 98 WebSearch
 86 TWikiAdminGroup
 84 WebNotify
 76 SupplementaryInformation3
 75 TWikiGuest
 
Aug 2009 4558 0 0 2587 WebStatistics
851 WebHome
415 TWikiVariables
 67 WebPreferences
 58 TWikiUsers
 39 SupplementaryInformation1
 32 TWikiGroups
 31 WebNotify
 25 WebSearch
 24 WebChanges
 21 NobodyGroup
 
Jul 2009 13970 0 0 7620 WebStatistics
3022 WebHome
697 TWikiVariables
223 TWikiUsers
121 SupplementaryInformation1
118 WebPreferences
102 WebNotify
 98 TWikiGuest
 98 TWikiGroups
 97 SupplementaryInformation3
 96 WebSearch
 
Jun 2009 15606 0 0 7275 WebStatistics
3539 WebHome
890 TWikiVariables
370 TWikiUsers
217 SupplementaryInformation1
191 WebPreferences
151 WebNotify
148 WebSearch
147 TWikiAdminGroup
137 SupplementaryInformation3
134 WebChanges
 
May 2009 14071 0 0 8684 WebStatistics
2612 WebHome
343 TWikiVariables
194 TWikiUsers
137 TWikiGuest
136 SupplementaryInformation1
126 WebNotify
125 WebPreferences
125 SupplementaryInformation3
 96 WebChanges
 90 WebSearch
 
Apr 2009 13897 0 0 8918 WebStatistics
2285 WebHome
506 TWikiVariables
250 TWikiUsers
154 SupplementaryInformation1
131 WebPreferences
118 WebSearch
105 WebNotify
104 TWikiGuest
 92 SupplementaryInformation3
 83 TWikiAdminGroup
 
Mar 2009 20760 0 0 14429 WebStatistics
2412 WebHome
779 TWikiVariables
446 TWikiUsers
226 SupplementaryInformation1
210 WebPreferences
178 SupplementaryInformation3
128 WebSearch
125 WebChanges
119 TWikiAdminGroup
117 WebNotify
 
Feb 2009 12653 0 0 8173 WebStatistics
1973 WebHome
312 TWikiUsers
256 TWikiVariables
179 SupplementaryInformation1
126 WebPreferences
114 WebSearch
 89 WebChanges
 80 TWikiAdminGroup
 78 SupplementaryInformation3
 76 TWikiGuest
 
Jan 2009 10889 0 0 6949 WebStatistics
2121 WebHome
161 TWikiVariables
154 SupplementaryInformation1
121 WebPreferences
121 TWikiUsers
 78 WebChanges
 72 WebSearch
 67 SupplementaryInformation3
 55 TWikiGuest
 54 TWikiAdminGroup
 
Dec 2008 9019 0 0 5175 WebStatistics
2153 WebHome
180 TWikiUsers
126 TWikiVariables
123 SupplementaryInformation1
 90 WebPreferences
 87 WebSearch
 79 WebChanges
 78 SupplementaryInformation3
 68 WebNotify
 63 TWikiAdminGroup
 
Nov 2008 7408 0 0 3559 WebStatistics
2010 WebHome
185 TWikiUsers
142 TWikiVariables
130 SupplementaryInformation1
108 WebChanges
106 WebSearch
100 WebPreferences
 66 TWikiGuest
 63 WebIndex
 61 SupplementaryInformation3
 
Oct 2008 8333 0 0 2895 WebStatistics
2417 WebHome
355 TWikiUsers
261 TWikiVariables
179 SupplementaryInformation1
157 WebPreferences
125 WebSearch
122 WebChanges
102 TWikiAdminGroup
100 WebNotify
 89 SupplementaryInformation3
 
Sep 2008 14439 0 0 8863 WebStatistics
2353 WebHome
504 TWikiUsers
491 TWikiVariables
268 SupplementaryInformation1
193 WebPreferences
158 TWikiAdminGroup
116 WebNotify
102 WebSearch
 99 WebChanges
 96 SupplementaryInformation3
 
Aug 2008 6634 0 0 2361 WebHome
2110 WebStatistics
310 TWikiUsers
157 SupplementaryInformation1
116 WebChanges
111 WebPreferences
109 WebSearch
 81 SupplementaryInformation3
 71 TWikiGuest
 69 WebNotify
 68 TWikiAdminGroup
 
Jul 2008 1422 0 0 386 WebHome
311 WebStatistics
 90 TWikiVariables
 73 TWikiUsers
 55 WebPreferences
 44 SupplementaryInformation1
 29 WebSearch
 27 TWikiAdminGroup
 26 WebNotify
 24 WebChanges
 23 TWikiGuest
 
Jun 2008 8410 0 0 3945 WebStatistics
2268 WebHome
247 TWikiUsers
223 TWikiVariables
172 SupplementaryInformation1
136 WebPreferences
118 WebChanges
 90 WebSearch
 72 TWikiAdminGroup
 70 SupplementaryInformation3
 63 WebIndex
 
May 2008 7810 0 0 2798 WebStatistics
2384 WebHome
311 TWikiUsers
258 TWikiVariables
178 SupplementaryInformation1
162 WebPreferences
125 WebSearch
 92 WebChanges
 90 TWikiAdminGroup
 86 TWikiGuest
 80 WebNotify
 
Apr 2008 3666 0 0 1342 WebHome
1279 WebStatistics
 93 SupplementaryInformation1
 90 TWikiUsers
 78 TWikiVariables
 62 WebPreferences
 47 SupplementaryInformation3
 46 WebSearch
 43 WebChanges
 43 TWikiGuest
 38 WebIndex
 
Mar 2008 5299 0 0 2106 WebHome
1806 WebStatistics
181 TWikiUsers
 95 SupplementaryInformation1
 80 WebPreferences
 67 TWikiVariables
 63 WebSearch
 52 TWikiAdminGroup
 52 SupplementaryInformation3
 45 WebChanges
 42 WebNotify
 
Feb 2008 4383 0 0 1879 WebHome
1137 WebStatistics
156 TWikiUsers
108 SupplementaryInformation1
 89 WebPreferences
 70 WebChanges
 65 WebSearch
 55 TWikiVariables
 52 TWikiAdminGroup
 51 TWikiGuest
 47 WebNotify
 
Jan 2008 5657 0 0 1951 WebHome
1856 WebStatistics
254 TWikiUsers
139 SupplementaryInformation1
115 WebPreferences
 87 WebSearch
 72 TWikiGuest
 67 SupplementaryInformation3
 65 WebNotify
 65 TWikiAdminGroup
 56 WebChanges
 
Dec 2007 4760 0 0 2436 WebStatistics
1127 WebHome
137 TWikiUsers
 68 SupplementaryInformation1
 64 WebPreferences
 63 TWikiVariables
 60 WebSearch
 46 WebChanges
 45 TWikiGuest
 45 TWikiAdminGroup
 41 WebNotify
 
Nov 2007 4589 0 0 1631 WebStatistics
1225 WebHome
238 TWikiUsers
137 SupplementaryInformation1
114 WebPreferences
 76 TWikiVariables
 73 TWikiGuest
 71 TWikiAdminGroup
 65 WebChanges
 63 SupplementaryInformation3
 61 WebSearch
 
Oct 2007 1793 0 0 520 WebStatistics
429 WebHome
 74 TWikiUsers
 70 SupplementaryInformation1
 59 WebChanges
 44 WebPreferences
 40 TWikiVariables
 38 WebSearch
 34 SupplementaryInformation3
 32 TWikiGuest
 31 TWikiGroups
 
Sep 2007 3672 0 0 1206 WebStatistics
613 WebHome
216 TWikiUsers
117 SupplementaryInformation1
 85 WebPreferences
 73 WebChanges
 72 WebSearch
 52 TWikiAdminGroup
 52 SupplementaryInformation3
 48 WebIndex
 46 WebNotify
 
Aug 2007 4341 0 0 1951 WebStatistics
397 WebHome
270 TWikiUsers
 97 TWikiVariables
 92 SupplementaryInformation1
 90 WebPreferences
 44 TWikiAdminGroup
 42 WebSearch
 41 WebChanges
 35 SupplementaryInformation3
 28 WebIndex
 
Jul 2007 3904 0 0 1476 WebStatistics
529 WebHome
202 TWikiVariables
142 TWikiUsers
 97 SupplementaryInformation1
 56 WebChanges
 52 WebSearch
 51 SupplementaryInformation3
 46 TWikiAdminGroup
 41 TWikiGuest
 37 WebIndex
 
Jun 2007 6852 0 0 3487 WebStatistics
541 WebHome
268 TWikiVariables
156 TWikiUsers
 90 SupplementaryInformation1
 77 WebPreferences
 70 WebChanges
 61 TWikiGuest
 56 WebIndex
 56 SupplementaryInformation3
 52 WebSearch
 
May 2007 5788 0 0 3316 WebStatistics
447 WebHome
204 TWikiVariables
 99 TWikiUsers
 68 SupplementaryInformation1
 54 WebChanges
 45 WebSearch
 42 WebPreferences
 35 SupplementaryInformation3
 34 TWikiGuest
 30 WebIndex
 
Apr 2007 3547 0 0 1278 WebStatistics
576 WebHome
155 TWikiUsers
 88 SupplementaryInformation1
 65 WebSearch
 62 WebChanges
 51 WebPreferences
 49 SupplementaryInformation3
 47 WebNotify
 45 TWikiGroups
 44 TWikiAdminGroup
 
Mar 2007 3579 0 0 1105 WebStatistics
491 WebHome
162 TWikiVariables
148 TWikiUsers
119 SupplementaryInformation1
118 WebChanges
102 WebSearch
 96 JeffreyBarrick
 94 WebPreferences
 83 WebIndex
 76 TWikiGuest
 
Feb 2007 3020 0 0 1032 WebStatistics
455 WebHome
154 TWikiUsers
 80 TWikiVariables
 79 WebChanges
 76 SupplementaryInformation1
 43 TWikiAdminGroup
 42 WebSearch
 41 WebPreferences
 40 TWikiGuest
 38 TWikiGroups
 
Jan 2007 2805 0 0 861 WebStatistics
388 WebHome
146 TWikiUsers
 76 SupplementaryInformation1
 68 WebChanges
 67 WebPreferences
 62 TWikiVariables
 42 TWikiGroups
 38 WebSearch
 38 TWikiAdminGroup
 37 TWikiGuest
 
Dec 2006 4667 2 0 3086 WebStatistics
367 WebHome
255 TWikiVariables
110 TWikiUsers
 47 SupplementaryInformation1
 43 WebPreferences
 39 WebSearch
 33 WebChanges
 29 TWikiAdminGroup
 23 JeffreyBarrick
 21 SupplementaryInformation3
  2 JoeGlotz
Nov 2006 7764 0 0 5216 WebStatistics
589 WebHome
258 TWikiUsers
211 TWikiVariables
 91 SupplementaryInformation1
 90 WebPreferences
 69 WebSearch
 63 WebChanges
 61 WebNotify
 59 TWikiAdminGroup
 51 TWikiGuest
 
Oct 2006 2924 0 0 1891 WebStatistics
231 WebHome
111 TWikiVariables
 59 TWikiUsers
 37 SupplementaryInformation1
 35 TWikiAdminGroup
 27 WebPreferences
 27 WebChanges
 25 WebSearch
 25 WebNotify
 21 TWikiGroups
 
Sep 2006 3188 0 0 1339 WebStatistics
306 WebHome
180 TWikiVariables
122 TWikiUsers
 55 WebChanges
 52 WebPreferences
 45 WebIndex
 43 WebSearch
 41 TWikiGroups
 41 SupplementaryInformation1
 40 TWikiGuest
 
Aug 2006 3525 10 0 1939 WebStatistics
358 WebHome
184 TWikiUsers
 56 SupplementaryInformation1
 55 WebPreferences
 53 TWikiVariables
 47 WebSearch
 46 TWikiAdminGroup
 42 WebChanges
 35 WebNotify
 32 WebIndex
 10 JeffreyBarrick
Jul 2006 2119 0 0 1187 WebStatistics
215 WebHome
119 TWikiUsers
 85 TWikiVariables
 50 AsqfkkkGuy?
 29 SupplementaryInformation1
 28 WebPreferences
 25 WebChanges
 24 WebSearch
 22 TWikiGroups
 17 TWikiAdminGroup
 
Jun 2006 4632 0 0 1924 WebStatistics
460 WebHome
341 AsqfkkkGuy?
260 TWikiUsers
248 TWikiVariables
 90 SupplementaryInformation1
 72 WebPreferences
 57 WebChanges
 55 WebSearch
 45 TWikiGroups
 44 WebIndex
 
May 2006 2276 0 0 959 WebStatistics
359 WebHome
106 TWikiUsers
 52 SupplementaryInformation1
 46 WebChanges
 44 WebPreferences
 40 WebIndex
 39 WebSearch
 31 TWikiGuest
 29 TWikiVariables
 19 WebRss
 
Apr 2006 1860 0 0 427 WebStatistics
424 WebHome
152 TWikiUsers
 99 TWikiVariables
 55 SupplementaryInformation1
 37 WebChanges
 35 WebPreferences
 33 TWikiAdminGroup
 32 WebSearch
 28 WebIndex
 25 JeffreyBarrick
 
Mar 2006 2178 6 0 587 WebStatistics
477 WebHome
153 TWikiUsers
 90 SupplementaryInformation1
 67 WebPreferences
 40 WebSearch
 38 WebChanges
 36 TWikiGuest
 31 TWikiGroups
 26 SupplementaryInformation3
 24 WebNotify
  3 TestRegistrationUser?
  2 AliRose?
  1 JeffreyBarrick
Feb 2006 5525 4 0 2783 WebStatistics
434 WebHome
328 TWikiVariables
270 TWikiUsers
 91 WebPreferences
 88 SupplementaryInformation1
 73 WebSearch
 68 TWikiAdminGroup
 65 TWikiGuest
 58 WebNotify
 57 TWikiGroups
  2 WikiMan?
  2 AojfnasGuy?
Jan 2006 2244 6 0 1057 WebStatistics
290 WebHome
 99 TWikiUsers
 76 TWikiVariables
 30 SupplementaryInformation1
 27 WebChanges
 24 SupplementaryInformation3
 23 WebSearch
 22 TWikiGuest
 22 TWikiGroups
 21 WebIndex
  2 SinerAram?
  2 AsqfkkkGuy?
  2 AaxipvxGuy?
Dec 2005 30 0 0  25 WebHome
  2 WadeWinkler
  1 TWikiAdminGroup
  1 InbalJona
  1 BradynRebolledo?
 
Nov 2005 857 17 0 257 WebHome
 83 WebStatistics
 65 TWikiUsers
 49 TWikiVariables
 21 SupplementaryInformation3
 16 SupplementaryInformation1
 14 WebSearch
 12 WebChanges
 11 WebIndex
 11 BrittonRoe?
 10 WebPreferences
  3 JeffreyBarrick
  2 RyneCorrell?
  2 KaiBladen?
  2 EfrainBoth?
  2 DominiqueNorby?
  2 ColemanRaines?
  2 BradynRebolledo?
  2 ArmaniHammes?
Oct 2005 472 2 0 166 WebHome
 43 TWikiUsers
 23 TWikiVariables
 19 WebStatistics
 19 WebPreferences
 14 SupplementaryInformation1
 11 WebSearch
  9 TWikiAdminGroup
  8 WebNotify
  7 WebIndex
  5 WebRss
  2 BrittonRoe?
Sep 2005 1544 4 0 457 WebHome
355 TWikiUsers
 64 TWikiVariables
 64 SupplementaryInformation1
 52 WebPreferences
 47 WebStatistics
 28 WebSearch
 28 TWikiAdminGroup
 26 SupplementaryInformation3
 25 WebNotify
 24 WebIndex
  2 VcCv?
  2 JeffreyBarrick
Aug 2005 441 0 0 123 WebHome
 41 WebStatistics
 27 TWikiUsers
 21 SupplementaryInformation1
 20 WebPreferences
 15 WebSearch
 12 WebNotify
 12 TWikiGroups
 11 TWikiGuest
 10 WebIndex
 10 TWikiAdminGroup
 
Jul 2005 1827 3 0 483 WebHome
189 WebStatistics
111 TWikiUsers
109 TWikiVariables
 92 WebPreferences
 57 SupplementaryInformation1
 51 TWikiAdminGroup
 44 WebNotify
 40 WebSearch
 40 TWikiGuest
 36 SupplementaryInformation3
  3 JeffreyBarrick
Jun 2005 468 0 0 256 WebHome
 22 SupplementaryInformation1
 19 WebChanges
 17 WebPreferences
 17 WebIndex
 14 TWikiGroups
 12 WebNotify
 11 TWikiGuest
 11 TWikiAdminGroup
  7 WebRss
  7 NobodyGroup
 
May 2005 735 0 0 205 WebHome
 32 WebPreferences
 32 TWikiVariables
 31 SupplementaryInformation1
 28 TWikiUsers
 27 WebNotify
 26 TWikiGroups
 22 TWikiGuest
 19 WebStatistics
 19 WebSearch
 19 TWikiAdminGroup
 
Apr 2005 615 12 4 216 WebHome
 27 SupplementaryInformation1
 21 WebPreferences
 21 WebNotify
 20 TWikiAdminGroup
 17 WebSearch
 15 TWikiGuest
 15 TWikiGroups
 13 WebIndex
 13 WebChanges
 13 TWikiUsers
 16 JeffreyBarrick
Mar 2005 2288 15 0 667 WebStatistics
321 TWikiVariables
318 WebHome
147 SupplementaryInformation1
145 TWikiUsers
109 WebPreferences
 66 TWikiAdminGroup
 61 WebNotify
 47 WebSearch
 46 TWikiGuest
 42 TWikiGroups
 15 JeffreyBarrick
Feb 2005 1262 3 0 361 WebStatistics
242 WebHome
181 TWikiVariables
128 SupplementaryInformation1
 31 WebSearch
 31 WebPreferences
 28 TWikiAdminGroup
 27 WebNotify
 27 WebChanges
 23 WebIndex
 22 TWikiUsers
  2 ShaojieZhang?
  1 JeffreyBarrick
Jan 2005 662 0 0 170 WebHome
 90 SupplementaryInformation1
 47 TWikiUsers
 40 WebPreferences
 36 WebStatistics
 34 WebNotify
 27 TWikiAdminGroup
 25 WebSearch
 23 TWikiGroups
 21 TWikiGuest
 18 TWikiVariables
 
Dec 2004 155 0 0  48 WebHome
 21 SupplementaryInformation1
 12 WebStatistics
 12 WebPreferences
 10 TWikiVariables
  9 WebChanges
  7 WebSearch
  4 WebIndex
  4 TWikiUsers
  4 TWikiAdminGroup
  4 FileAttachment
 
Oct 2004 422 0 0 185 WebHome
 88 SupplementaryInformation1
 20 WebSearch
 15 WebStatistics
 13 WebNotify
 12 WebIndex
  9 TWikiGroups
  9 TWikiAdminGroup
  7 WebPreferences
  7 NobodyGroup
  7 FileAttachment
 
Sep 2004 55 2 0  34 WebHome
  6 SupplementaryInformation1
  3 TWikiUsers
  2 KristianLink
  1 WebTopicList
  1 WebStatistics
  1 WebRss
  1 WebIndex
  1 WebChanges
  1 TWikiVariables
  1 TWikiAdminGroup
  2 KristianLink
Aug 2004 33 0 0  17 WebHome
  6 SupplementaryInformation1
  1 WebTopicList
  1 WebStatistics
  1 WebRss
  1 WebIndex
  1 TWikiVariables
  1 TWikiUsers
  1 TWikiAdminGroup
  1 NobodyGroup
  1 JeffreyBarrick
 
May 2004 584 1 0 493 WebHome
 76 SupplementaryInformation1
  6 WebStatistics
  3 WebSearch
  3 WebIndex
  1 WebChanges
  1 FileAttachment
  1 JeffreyBarrick
Apr 2004 1207 2 0 1070 WebHome
 93 SupplementaryInformation1
 10 WebIndex
  8 WebChanges
  7 WebSearch
  7 JeffreyBarrick
  3 TWikiUsers
  3 GailEmilsson
  1 TWikiGroups
  1 NobodyGroup
  2 JeffreyBarrick
Mar 2004 904 0 0 881 WebHome
 10 SupplementaryInformation1
  3 WebIndex
  3 JeffreyBarrick
  2 TWikiUsers
  1 WebSearch
  1 WebChanges
  1 TWikiGuest
  1 GailEmilsson
 
Feb 2004 464 0 0 441 WebHome
 20 SupplementaryInformation1
  1 WebIndex
  1 WebChanges
 
Jan 2004 207 1 0 203 WebHome
  4 SupplementaryInformation1
  1 JeffreyBarrick
Dec 2003 184 11 0 157 WebHome
 15 SupplementaryInformation1
  3 WebIndex
  3 WebChanges
  1 webpreferences
  1 WebRss
  1 WebPreferences
  1 TWikiUsers
  1 JeffreyBarrick
  9 JeffreyBarrick
  2 GailEmilsson
Nov 2003 177 14 0 130 WebHome
 32 SupplementaryInformation1
  3 WebSearch
  3 WebChanges
  2 WebPreferences
  1 webhome
  1 WebIndex
  1 TWikiGroups
  1 JeffreyBarrick
 14 JeffreyBarrick
Oct 2003 197 13 1 162 WebHome
 32 SupplementaryInformation1
  2 WebPreferences
  1 WebChanges
 14 JeffreyBarrick
Sep 2003 79 15 0  43 WebHome
 12 WebPreferences
  9 SupplementaryInformation1
  4 TWikiGroups
  3 TWikiAdminGroup
  2 JeffreyBarrick
  1 WebSearch
  1 WebIndex
  1 TWikiUsers
  1 SupplementaryInformation1-BLAST
 13 JeffreyBarrick
  2 TWikiGuest

Notes:

 


WebTopicList  

24 Nov 2001 - 11:36 - NEW   PeterThoeny?

See also the verbose WebIndex.

 


ZashaWeinberg  

23 Mar 2004 - 14:18 - NEW   ZashaWeinberg

Personal Preferences (details in TWikiVariables)

Related topics

 



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